snapatac2.datasets.pbmc500

snapatac2.datasets.pbmc500(downsampled=False)

scATAC-seq dataset of 500 PBMCs from 10x Genomics.

This function returns the path to the fragment file of the 10X scATAC-seq dataset containing ~500 PBMCs.

Parameters:

downsampled (bool) – Whether to return downsampled dataset.

Returns:

Path to the fragment file.

Return type:

Path