References#
Traag et al. (2019), From Louvain to Leiden: guaranteeing well-connected communities, Sci Rep.
Blondel et al. (2008), Fast unfolding of communities in large networks, J. Stat. Mech..
Levine et al. (2015), Data-Driven Phenotypic Dissection of AML Reveals Progenitor–like Cells that Correlate with Prognosis, Cell.
Zhang et al. (2021), A single-cell atlas of chromatin accessibility in the human genome, Cell.
Weirauch et al. (2014), Determination and inference of eukaryotic transcription factor sequence specificity, Cell.
Meuleman et al. (2020), Index and biological spectrum of human DNase I hypersensitive sites, Nature.
Miao et al. (2024), Uniform quantification of single-nucleusATAC-seq data with Paired-InsertionCounting (PIC) and a model-based insertionrate estimator, Nature Methods.