snapatac2.read_mtx

snapatac2.read_mtx(mtx_file, file, sorted)

Read Matrix Market file.

Parameters

• mtx_file – File name of the input matrix market file.

• file – File name of the output “.h5ad” file.

• sorted – Indicate whether the entries in the matrix market file have been sorted by row and column indices. When the data is sorted, only a small amount of (constant) memory will be used.