Plotting: pl#

pl.tsse(adata[, show_cells, min_fragment, ...])

Plot the TSS enrichment vs.

pl.spectral_eigenvalues(adata[, width, ...])

Plot the eigenvalues of spectral embedding.

pl.scrublet(adata[, width, height, show, ...])

Plot the doublet score distribution.

pl.umap(adata, color[, use_rep, ...])

Plot the UMAP embedding.

pl.motif_enrichment(enrichment[, ...])

Plot the motif enrichment result.

pl.regions(data, groupby, peaks[, width, ...])

type data

AnnData | AnnDataSet

pl.network_edge_stat(network, **kwargs)

type network

PyDiGraph

pl.render_plot(fig[, width, height, ...])

rtype

plotly.graph_objects.Figure' | None