snapatac2.read#

snapatac2.read(filename, backed='r+', backend=None)#

Read .h5ad-formatted hdf5 file.

Parameters:

  • filename (Path) – File name of data file.

  • backed (Literal['r', 'r+'] | None) – Default is r+. If 'r', the file is opened in read-only mode. If 'r+', the file is opened in read/write mode. If None, the AnnData object is read into memory.

  • backend (Literal['hdf5'] | None) –