Metrics#

Quality Control#

metrics.frag_size_distr(adata, *[, ...])

Compute the fragment size distribution of the dataset.

metrics.tsse(adata, gene_anno, *[, inplace, ...])

Compute the TSS enrichment score (TSSe) for each cell.

metrics.frip(adata, regions, *[, inplace, ...])

Add fraction of reads in peaks (FRiP) to the AnnData object.