snapatac2.datasets.pbmc5k#
- snapatac2.datasets.pbmc5k(type='fragment')[source]#
scATAC-seq dataset of 5k PBMCs from 10x Genomics.
- Parameters:
type (
Literal['fragment','h5ad','annotated_h5ad']) –- One of the following:
”fragment”: the fragment file.
”h5ad”: preprocessed h5ad file.
”annotated_h5ad”: annotated h5ad file.
- Returns:
path to the file.
- Return type:
Path